BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017G03SP1|AL427202
(937 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1836 0.0
>3x_Contig1788
Length = 28493
Score = 1836 bits (924), Expect = 0.0
Identities = 934/938 (99%), Gaps = 1/938 (0%)
Strand = Plus / Minus
Query: 1 actctggatctttcagctttag-attctcttgaacttcagccaactgttgctgtaactga 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 19708 actctggatctttcagctttagcattctcttgaacttcagccaactgttgctgtaactga 19649
Query: 60 gaggacaaagtgttaaactgggccaacctctcctttaactgcctttcctcttcttgagct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19648 gaggacaaagtgttaaactgggccaacctctcctttaactgcctttcctcttcttgagct 19589
Query: 120 tgttgcaactgtgtttgcaaatcctcgttctgagtctgcacagcatgataatttgcctct 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19588 tgttgcaactgtgtttgcaaatcctcgttctgagtctgcacagcatgataatttgcctct 19529
Query: 180 gcaacagaagcttgttgacttaactcttcgttttgtgcacgaagagcgttcaattgcgtc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19528 gcaacagaagcttgttgacttaactcttcgttttgtgcacgaagagcgttcaattgcgtc 19469
Query: 240 tgtatctcctccgtttgacgaacttcttcattgtaagacgcacgcaaaccaatgagttta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19468 tgtatctcctccgtttgacgaacttcttcattgtaagacgcacgcaaaccaatgagttta 19409
Query: 300 gtctcgatcgatgccttcatgttagttatacgagtaagttcattctgagcagctgttttc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19408 gtctcgatcgatgccttcatgttagttatacgagtaagttcattctgagcagctgttttc 19349
Query: 360 tcttcatgaactttcgtagcttgtgtcgttaatgaactcacctgagtggagagatttgca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19348 tcttcatgaactttcgtagcttgtgtcgttaatgaactcacctgagtggagagatttgca 19289
Query: 420 agttcagtagtggcctgagaaagcgatgccggtggcacaatttcacgattgtkagaagtg 479
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 19288 agttcagtagtggcctgagaaagcgatgccggtggcacaatttcacgattgttagaagtg 19229
Query: 480 acttccctcgaagggacagaaacacctccaaagtttggaacacttggtaacgaagaatta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19228 acttccctcgaagggacagaaacacctccaaagtttggaacacttggtaacgaagaatta 19169
Query: 540 cgtgcagtgggtggtggaggaggagctgcagagcctacgtgtgtaggagcagtttgcata 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19168 cgtgcagtgggtggtggaggaggagctgcagagcctacgtgtgtaggagcagtttgcata 19109
Query: 600 tactgctgctgctgctgctgctgctgttgttgttgttgctggtcgttaccaccttcttca 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19108 tactgctgctgctgctgctgctgctgttgttgttgttgctggtcgttaccaccttcttca 19049
Query: 660 gggataatggtttgtccaaatgtagatgaaggtctaaatttcctagcatttggtgccaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19048 gggataatggtttgtccaaatgtagatgaaggtctaaatttcctagcatttggtgccaaa 18989
Query: 720 tgtgttgaaggctgagccgatgattgtggctgggaaggaagagatggaggcggaggagtg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18988 tgtgttgaaggctgagccgatgattgtggctgggaaggaagagatggaggcggaggagtg 18929
Query: 780 aatgattcatttagaccaagcaagtyatccagagcgctattactggttttctgagcttga 839
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 18928 aatgattcatttagaccaagcaagtcatccagagcgctattactggttttctgagcttga 18869
Query: 840 accggagctgcaaaattttggtaattttgaccagcatctccggtgcttgctacactaatg 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18868 accggagctgcaaaattttggtaattttgaccagcatctccggtgcttgctacactaatg 18809
Query: 900 cgctgttgttgttgttgttgttgttgttgatggtamaa 937
||||||||||||||||||||||||||||||||||| ||
Sbjct: 18808 cgctgttgttgttgttgttgttgttgttgatggtacaa 18771
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9226
Number of Sequences: 1807
Number of extensions: 9226
Number of successful extensions: 1262
Number of sequences better than 1.0e-20: 1
length of query: 937
length of database: 10,358,551
effective HSP length: 16
effective length of query: 921
effective length of database: 10,329,639
effective search space: 9513597519
effective search space used: 9513597519
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)